Review



e. coli mk01 strain  (Addgene inc)


Bioz Verified Symbol Addgene inc is a verified supplier  
  • Logo
  • About
  • News
  • Press Release
  • Team
  • Advisors
  • Partners
  • Contact
  • Bioz Stars
  • Bioz vStars
    • 90
      Buy from Supplier

    Structured Review

    Addgene inc e. coli mk01 strain
    <t>E.</t> <t>coli</t> bacteria host a synthetic optogenetic oscillator. Growing colonies form concentric rings of the fluorescent reporters. The oscillations can either be free-running (constant light) or forced (cycles of light and dark). Resonance occurs when the frequency of the external forcing matches with the frequency of the free-running oscillator. Subharmonic resonance occurs when the cells oscillate at a frequency that is a fraction of the driving frequency, whereas superharmonic resonance occurs when a system oscillates at a frequency that is a multiple of the driving frequency. Resonance phenomena are characterised by an increase in the amplitude of oscillations. Changes of the external forcing frequency can lead to bifurcation, where the period of oscillation is doubled (hence period-doubling) and a pattern of two peaks per every oscillation appears (period-2). Successive period-doubling events lead to period- \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${{{\mathcal{N}}}}$$\end{document} N , with \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${{{\mathcal{N}}}}$$\end{document} N peaks repeating per oscillation. Further period-doubling can drive the system to chaos, where small variations between the initial parameters will lead to huge changes in the course of oscillations. The lack of repetitive pattern in the chaotic system makes it impossible to predict the trajectory of oscillations. In this scenario cells are expected to quickly desynchronise, precluding the visualisation of ring patterns. Illustration of colonies with oscillations was inspired by .
    E. Coli Mk01 Strain, supplied by Addgene inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/e. coli mk01 strain/product/Addgene inc
    Average 90 stars, based on 1 article reviews
    e. coli mk01 strain - by Bioz Stars, 2026-03
    90/100 stars

    Images

    1) Product Images from "From resonance to chaos by modulating spatiotemporal patterns through a synthetic optogenetic oscillator"

    Article Title: From resonance to chaos by modulating spatiotemporal patterns through a synthetic optogenetic oscillator

    Journal: Nature Communications

    doi: 10.1038/s41467-024-51626-w

    E. coli bacteria host a synthetic optogenetic oscillator. Growing colonies form concentric rings of the fluorescent reporters. The oscillations can either be free-running (constant light) or forced (cycles of light and dark). Resonance occurs when the frequency of the external forcing matches with the frequency of the free-running oscillator. Subharmonic resonance occurs when the cells oscillate at a frequency that is a fraction of the driving frequency, whereas superharmonic resonance occurs when a system oscillates at a frequency that is a multiple of the driving frequency. Resonance phenomena are characterised by an increase in the amplitude of oscillations. Changes of the external forcing frequency can lead to bifurcation, where the period of oscillation is doubled (hence period-doubling) and a pattern of two peaks per every oscillation appears (period-2). Successive period-doubling events lead to period- \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${{{\mathcal{N}}}}$$\end{document} N , with \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${{{\mathcal{N}}}}$$\end{document} N peaks repeating per oscillation. Further period-doubling can drive the system to chaos, where small variations between the initial parameters will lead to huge changes in the course of oscillations. The lack of repetitive pattern in the chaotic system makes it impossible to predict the trajectory of oscillations. In this scenario cells are expected to quickly desynchronise, precluding the visualisation of ring patterns. Illustration of colonies with oscillations was inspired by .
    Figure Legend Snippet: E. coli bacteria host a synthetic optogenetic oscillator. Growing colonies form concentric rings of the fluorescent reporters. The oscillations can either be free-running (constant light) or forced (cycles of light and dark). Resonance occurs when the frequency of the external forcing matches with the frequency of the free-running oscillator. Subharmonic resonance occurs when the cells oscillate at a frequency that is a fraction of the driving frequency, whereas superharmonic resonance occurs when a system oscillates at a frequency that is a multiple of the driving frequency. Resonance phenomena are characterised by an increase in the amplitude of oscillations. Changes of the external forcing frequency can lead to bifurcation, where the period of oscillation is doubled (hence period-doubling) and a pattern of two peaks per every oscillation appears (period-2). Successive period-doubling events lead to period- \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${{{\mathcal{N}}}}$$\end{document} N , with \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${{{\mathcal{N}}}}$$\end{document} N peaks repeating per oscillation. Further period-doubling can drive the system to chaos, where small variations between the initial parameters will lead to huge changes in the course of oscillations. The lack of repetitive pattern in the chaotic system makes it impossible to predict the trajectory of oscillations. In this scenario cells are expected to quickly desynchronise, precluding the visualisation of ring patterns. Illustration of colonies with oscillations was inspired by .

    Techniques Used: Bacteria

    Primers list
    Figure Legend Snippet: Primers list

    Techniques Used: Construct, Sequencing



    Similar Products

    e. coli mk01 strain  (Addgene inc)
    90
    Addgene inc e. coli mk01 strain
    <t>E.</t> <t>coli</t> bacteria host a synthetic optogenetic oscillator. Growing colonies form concentric rings of the fluorescent reporters. The oscillations can either be free-running (constant light) or forced (cycles of light and dark). Resonance occurs when the frequency of the external forcing matches with the frequency of the free-running oscillator. Subharmonic resonance occurs when the cells oscillate at a frequency that is a fraction of the driving frequency, whereas superharmonic resonance occurs when a system oscillates at a frequency that is a multiple of the driving frequency. Resonance phenomena are characterised by an increase in the amplitude of oscillations. Changes of the external forcing frequency can lead to bifurcation, where the period of oscillation is doubled (hence period-doubling) and a pattern of two peaks per every oscillation appears (period-2). Successive period-doubling events lead to period- \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${{{\mathcal{N}}}}$$\end{document} N , with \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${{{\mathcal{N}}}}$$\end{document} N peaks repeating per oscillation. Further period-doubling can drive the system to chaos, where small variations between the initial parameters will lead to huge changes in the course of oscillations. The lack of repetitive pattern in the chaotic system makes it impossible to predict the trajectory of oscillations. In this scenario cells are expected to quickly desynchronise, precluding the visualisation of ring patterns. Illustration of colonies with oscillations was inspired by .
    E. Coli Mk01 Strain, supplied by Addgene inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/e. coli mk01 strain/product/Addgene inc
    Average 90 stars, based on 1 article reviews
    e. coli mk01 strain - by Bioz Stars, 2026-03
    90/100 stars
    		  Buy from Supplier

    Image Search Results


    E. coli bacteria host a synthetic optogenetic oscillator. Growing colonies form concentric rings of the fluorescent reporters. The oscillations can either be free-running (constant light) or forced (cycles of light and dark). Resonance occurs when the frequency of the external forcing matches with the frequency of the free-running oscillator. Subharmonic resonance occurs when the cells oscillate at a frequency that is a fraction of the driving frequency, whereas superharmonic resonance occurs when a system oscillates at a frequency that is a multiple of the driving frequency. Resonance phenomena are characterised by an increase in the amplitude of oscillations. Changes of the external forcing frequency can lead to bifurcation, where the period of oscillation is doubled (hence period-doubling) and a pattern of two peaks per every oscillation appears (period-2). Successive period-doubling events lead to period- \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${{{\mathcal{N}}}}$$\end{document} N , with \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${{{\mathcal{N}}}}$$\end{document} N peaks repeating per oscillation. Further period-doubling can drive the system to chaos, where small variations between the initial parameters will lead to huge changes in the course of oscillations. The lack of repetitive pattern in the chaotic system makes it impossible to predict the trajectory of oscillations. In this scenario cells are expected to quickly desynchronise, precluding the visualisation of ring patterns. Illustration of colonies with oscillations was inspired by .

    Journal: Nature Communications

    Article Title: From resonance to chaos by modulating spatiotemporal patterns through a synthetic optogenetic oscillator

    doi: 10.1038/s41467-024-51626-w

    Figure Lengend Snippet: E. coli bacteria host a synthetic optogenetic oscillator. Growing colonies form concentric rings of the fluorescent reporters. The oscillations can either be free-running (constant light) or forced (cycles of light and dark). Resonance occurs when the frequency of the external forcing matches with the frequency of the free-running oscillator. Subharmonic resonance occurs when the cells oscillate at a frequency that is a fraction of the driving frequency, whereas superharmonic resonance occurs when a system oscillates at a frequency that is a multiple of the driving frequency. Resonance phenomena are characterised by an increase in the amplitude of oscillations. Changes of the external forcing frequency can lead to bifurcation, where the period of oscillation is doubled (hence period-doubling) and a pattern of two peaks per every oscillation appears (period-2). Successive period-doubling events lead to period- \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${{{\mathcal{N}}}}$$\end{document} N , with \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${{{\mathcal{N}}}}$$\end{document} N peaks repeating per oscillation. Further period-doubling can drive the system to chaos, where small variations between the initial parameters will lead to huge changes in the course of oscillations. The lack of repetitive pattern in the chaotic system makes it impossible to predict the trajectory of oscillations. In this scenario cells are expected to quickly desynchronise, precluding the visualisation of ring patterns. Illustration of colonies with oscillations was inspired by .

    Article Snippet: To generate the bacterial chassis, we deleted the clxCP gene from the E. coli MK01 strain , which was a kind gift of Sander Tans (Addgene #195090).

    Techniques: Bacteria

    Primers list

    Journal: Nature Communications

    Article Title: From resonance to chaos by modulating spatiotemporal patterns through a synthetic optogenetic oscillator

    doi: 10.1038/s41467-024-51626-w

    Figure Lengend Snippet: Primers list

    Article Snippet: To generate the bacterial chassis, we deleted the clxCP gene from the E. coli MK01 strain , which was a kind gift of Sander Tans (Addgene #195090).

    Techniques: Construct, Sequencing